Gene: AT5G57550 (Arabidopsis thaliana)

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Gene Identifier
AT5G57550
Transcript Identifier
AT5G57550.1
Gene Type
Coding gene
Location
5 : 23305055-23306384 : negative

Family

Gene family
HOM03M000094
(496 genes in 14 species)
specific family
Subfamily
ORTHO03M016382
(3 genes in 3 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
xyloglucan endotransglucosylase/hydrolase 25
Curated Summary
xyloglucan endotransglycosylase-related protein (XTR3)
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Identifiers

Identifier Name
aliasXTR3
aliasxyloglucan endotransglycosylase 3
aliasxyloglucan endotransglucosylase/hydrolase 25
aliasXTH25
uniprotQ38907

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009832ISSUniProtplant-type cell wall biogenesis1 2 3 4 5 6
GO:0006073IEAUniProtcellular glucan metabolic process1 2 3 4 5
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0044264IEAPLAZA Homologycellular polysaccharide metabolic processHOM03M000094
GO:0044262IEAPLAZA Homologycellular carbohydrate metabolic processHOM03M000094
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000094
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000094
GO:0005976IEAPLAZA Homologypolysaccharide metabolic processHOM03M000094
GO:0044042IEAPLAZA Homologyglucan metabolic processHOM03M000094

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016798ISSGene Ontologyhydrolase activity, acting on glycosyl bonds1
GO:0016762ISS, IEA, UniProtxyloglucan:xyloglucosyl transferase activity1 2 3 4 5 6
GO:0004553IEAUniProthydrolase activity, hydrolyzing O-glycosyl compounds1 2 3 4 5
GO:0016758IEAPLAZA Homologytransferase activity, transferring hexosyl groupsHOM03M000094
GO:0016757IEAPLAZA Homologytransferase activity, transferring glycosyl groupsHOM03M000094
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000094
GO:0016740IEAPLAZA Homologytransferase activityHOM03M000094

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0048046IEAUniProtapoplast1 2 3 4 5
GO:0005618IEAUniProtcell wall1 2 3 4 5
GO:0071944IEAPLAZA Homologycell peripheryHOM03M000094
GO:0030312IEAPLAZA Homologyexternal encapsulating structureHOM03M000094
GO:0005623IEAPLAZA HomologycellHOM03M000094
GO:0044464IEAPLAZA Homologycell partHOM03M000094

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010713Xyloglucan endo-transglycosylase, C-terminal
IPR008263Glycoside hydrolase, family 16, active site
IPR008985Concanavalin A-like lectin/glucanases superfamily
IPR013320Concanavalin A-like lectin/glucanase, subgroup
IPR000757Glycoside hydrolase, family 16

Mapman id Description
10.7cell wall.modification
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network