Gene: AT5G57360 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G57360
- Transcript Identifier
- AT5G57360.2
- Gene Type
- Coding gene
- Location
- 5 : 23241597-23244415 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
Galactose oxidase/kelch repeat superfamily protein
- Curated Summary
-
Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. ZTL is the F-box component of an SCF complex implicated in the degradation of TOC1.
Identifiers
Identifier | Name |
---|---|
alias | ZEITLUPE |
alias | LOV KELCH PROTEIN 1 |
alias | FKF1-LIKE PROTEIN 2 |
alias | LKP1 |
alias | ADAGIO 1 |
alias | ADO1 |
alias | ZTL |
alias | FKL2 |
uniprot | Q94BT6 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
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- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0007623 | IMP, ISS, TAS | Gene Ontology | circadian rhythm | 1 2 3 |
GO:0043153 | IMP | Gene Ontology | entrainment of circadian clock by photoperiod | 1 |
GO:0009908 | IEA, IMP | UniProt | flower development | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 |
GO:0006511 | RCA, TAS | Gene Ontology | ubiquitin-dependent protein catabolic process | 1 2 |
GO:0010498 | IMP | Gene Ontology | proteasomal protein catabolic process | 1 |
GO:0031146 | IC | Gene Ontology | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 1 |
GO:0010114 | IMP | Gene Ontology | response to red light | 1 |
GO:0042752 | IMP, RCA | Gene Ontology | regulation of circadian rhythm | 1 2 |
GO:0006635 | RCA | Gene Ontology | fatty acid beta-oxidation | 1 |
GO:0009639 | RCA | Gene Ontology | response to red or far red light | 1 |
GO:0016558 | RCA | Gene Ontology | protein import into peroxisome matrix | 1 |
GO:0044265 | RCA | Gene Ontology | cellular macromolecule catabolic process | 1 |
GO:0016567 | IEA | UniProt | protein ubiquitination | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 |
GO:0018298 | IEA | UniProt | protein-chromophore linkage | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 |
GO:0048511 | IEA | UniProt | rhythmic process | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 |
GO:0007165 | IEA | InterPro | signal transduction |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0004842 | ISS | Gene Ontology | ubiquitin-protein ligase activity | 1 |
GO:0005515 | IPI, IEA | Gene Ontology | protein binding | 1 |
GO:0009882 | IDA | Gene Ontology | blue light photoreceptor activity | 1 |
GO:0009881 | IEA | UniProt | photoreceptor activity | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 |
GO:0004871 | IEA | InterPro | signal transducer activity | |
GO:0060089 | IEA | PLAZA Homology | molecular transducer activity | HOM03M001149 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | IEA, IDA, ISM, TAS | UniProt | nucleus | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 |
GO:0005829 | IDA | Gene Ontology | cytosol | 1 |
GO:0019005 | IPI | Gene Ontology | SCF ubiquitin ligase complex | 1 |
GO:0005737 | IEA | UniProt | cytoplasm | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.11.4.3.2 | protein.degradation.ubiquitin.E3.SCF.FBOX |
No SignalP domains detected for this gene.