Gene: AT5G56860 (Arabidopsis thaliana)

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Gene Identifier
AT5G56860
Transcript Identifier
AT5G56860.1
Gene Type
Coding gene
Location
5 : 22989630-22991351 : negative

Family

Gene family
HOM03M000160
(302 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
GATA type zinc finger transcription factor family protein
Curated Summary
Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.
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Identifiers

Identifier Name
aliasGNC
aliasGATA TRANSCRIPTION FACTOR 21
aliasGATA, nitrate-inducible, carbon metabolism-involved
aliasGATA21
uniprotQ5HZ36

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IMP, IEAGene Ontologyregulation of transcription, DNA-dependent1
GO:0010255IMPUniProtglucose mediated signaling pathway1 2 3 4 5
GO:0051171IEP, IMPGene Ontologyregulation of nitrogen compound metabolic process1 2
GO:0007623IEPUniProtcircadian rhythm1 2 3 4 5
GO:0009416IEPUniProtresponse to light stimulus1 2 3 4 5
GO:0009740IEPUniProtgibberellic acid mediated signaling pathway1 2 3 4 5
GO:0009910IMPUniProtnegative regulation of flower development1 2 3 4 5
GO:0010187IEPUniProtnegative regulation of seed germination1 2 3 4 5
GO:0010380IMPUniProtregulation of chlorophyll biosynthetic process1 2 3 4 5
GO:0010468IDAGene Ontologyregulation of gene expression1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0030154RCAGene Ontologycell differentiation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4
GO:0010467IEAPLAZA Homologygene expressionHOM03M000160
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000160
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000160
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000160
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000160
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000160
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000160
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000160
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000160
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000160
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000160
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000160
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000160
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000160
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000160
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000160
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000160
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000160
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000160
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000160
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000160
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5
GO:0005515IPIGene Ontologyprotein binding1
GO:0044212IDAUniProttranscription regulatory region DNA binding1 2 3 4 5
GO:0043565IEAUniProtsequence-specific DNA binding1 2 3 4
GO:0008270IEAUniProtzinc ion binding1 2 3 4
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03M000160
GO:0003677IEAPLAZA HomologyDNA bindingHOM03M000160
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000679Zinc finger, GATA-type
IPR013088Zinc finger, NHR/GATA-type

Mapman id Description
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-GATA
PlantTFDBGATA