PLAZA 3.0 Monocots gene overview : AT5G56210

Gene: AT5G56210 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G56210
Transcript Identifier: AT5G56210.1
Gene Type: Coding gene
Location: 5 : 22750660-22752363 : negative

Family

Gene family: HOM03M008615
(8 genes in 5 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: WPP domain interacting protein 2

Curated Summary: Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells.

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Identifiers

Identifier	Name
alias	WPP domain interacting protein 2
alias	WIP2
uniprot	Q9FH18

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006997	IGI	UniProt	nucleus organization	1 2 3 4 5

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0042803	IPI	Gene Ontology	protein homodimerization activity	1
GO:0046982	IPI	Gene Ontology	protein heterodimerization activity	1
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1
GO:0005635	IDA	UniProt	nuclear envelope	1 2 3 4 5
GO:0009504	IDA	UniProt	cell plate	1 2 3 4 5
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4
GO:0031965	IEA	UniProt	nuclear membrane	1 2 3 4

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

No InterPro domains detected for this gene.

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.