Gene: AT5G55740 (Arabidopsis thaliana)

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Gene Identifier
AT5G55740
Transcript Identifier
AT5G55740.1
Gene Type
Coding gene
Location
5 : 22561941-22564433 : negative

Family

Gene family
HOM03M000001
(3285 genes in 14 species)
specific family

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Descriptions

Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Curated Summary
Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.
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Identifiers

Identifier Name
aliaschlororespiratory reduction 21
aliasCRR21
uniprotQ9FM64

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016556IMP, RCA, UniProtmRNA modification1 2 3 4 5 6
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0030154RCAGene Ontologycell differentiation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005488IEAPLAZA HomologybindingHOM03M000001

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IEA, ISMUniProtchloroplast1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002885Pentatricopeptide repeat
IPR011990Tetratricopeptide-like helical

Mapman id Description
35.1.5not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
No SignalP domains detected for this gene.