Gene: AT5G55390 (Arabidopsis thaliana)

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Gene Identifier
AT5G55390
Transcript Identifier
AT5G55390.1
Gene Type
Coding gene
Location
5 : 22448152-22454414 : negative

Family

Gene family
HOM03M000964
(74 genes in 14 species)
specific family
Subfamily
ORTHO03M015181
(3 genes in 3 species)
specific family

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Descriptions

Description
ENHANCED DOWNY MILDEW 2
Curated Summary
Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.
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Identifiers

Identifier Name
aliasENHANCED DOWNY MILDEW 2
aliasEDM2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007165IMPGene Ontologysignal transduction1
GO:0050832IMPGene Ontologydefense response to fungus1
GO:0009911IMPGene Ontologypositive regulation of flower development1
GO:0010228IMPGene Ontologyvegetative to reproductive phase transition of meristem1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001965Zinc finger, PHD-type
IPR022702DNA (cytosine-5)-methyltransferase 1, replication foci domain

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.