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WorkbenchGene: AT5G55390 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G55390
- Transcript Identifier
- AT5G55390.1
- Gene Type
- Coding gene
- Location
- 5 : 22448152-22454414 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
ENHANCED DOWNY MILDEW 2
- Curated Summary
-
Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.
Identifiers
| Identifier | Name |
|---|---|
| alias | ENHANCED DOWNY MILDEW 2 |
| alias | EDM2 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0007165 | IMP | Gene Ontology | signal transduction | 1 |
| GO:0050832 | IMP | Gene Ontology | defense response to fungus | 1 |
| GO:0009911 | IMP | Gene Ontology | positive regulation of flower development | 1 |
| GO:0010228 | IMP | Gene Ontology | vegetative to reproductive phase transition of meristem | 1 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | sequence-specific DNA binding transcription factor activity | 1 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | IDA, ISM | Gene Ontology | nucleus | 1 2 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 27.3.67 | RNA.regulation of transcription.putative transcription regulator |
No SignalP domains detected for this gene.