PLAZA 3.0 Monocots gene overview : AT5G55200

Gene: AT5G55200 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G55200
Transcript Identifier: AT5G55200.1
Gene Type: Coding gene
Location: 5 : 22394705-22396335 : positive

Family

Gene family: HOM03M003283
(27 genes in 16 species)
specific family
Subfamily: ORTHO03M008681
(5 genes in 5 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: Co-chaperone GrpE family protein

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Identifiers

Identifier	Name
alias	mitochondrial GrpE 1
alias	MGE1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006457	ISS, IEA	Gene Ontology	protein folding	1
GO:0009411	IEP	Gene Ontology	response to UV	1
GO:0009407	RCA	Gene Ontology	toxin catabolic process	1
GO:0010583	RCA	Gene Ontology	response to cyclopentenone	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IDA	Gene Ontology	ATP binding	1
GO:0005507	IDA	Gene Ontology	copper ion binding	1
GO:0051087	IEA	InterPro	chaperone binding
GO:0042803	IEA	InterPro	protein homodimerization activity
GO:0000774	IEA	InterPro	adenyl-nucleotide exchange factor activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	ISM	Gene Ontology	chloroplast	1
GO:0005739	IDA	Gene Ontology	mitochondrion	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000740	GrpE nucleotide exchange factor
IPR013805	GrpE nucleotide exchange factor, coiled-coil
IPR009012	GrpE nucleotide exchange factor, head

Mapman id	Description
29.6	protein.folding

No SignalP domains detected for this gene.