Gene: AT5G54650 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G54650
Transcript Identifier
AT5G54650.1
Gene Type
Coding gene
Location
5 : 22197856-22201649 : negative

Family

Gene family
HOM03M000335
(170 genes in 16 species)
specific family
Subfamily
ORTHO03M010015
(4 genes in 4 species)
specific family

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Descriptions

Description
formin homology5
Curated Summary
Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.
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Identifiers

Identifier Name
aliasFh5
aliasATFH5
aliasFORMIN HOMOLOGY 5
aliasformin homology5
uniprotQ94B77

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009960IMPUniProtendosperm development1 2 3 4 5 6 7
GO:0030041IDAUniProtactin filament polymerization1 2 3 4 5 6 7
GO:0045010IDA, IEA, UniProtactin nucleation1 2 3 4 5 6 7
GO:0048317IGIUniProtseed morphogenesis1 2 3 4 5 6 7
GO:0030832IEAPLAZA Homologyregulation of actin filament lengthHOM03M000335
GO:0030833IEAPLAZA Homologyregulation of actin filament polymerizationHOM03M000335
GO:0030838IEAPLAZA Homologypositive regulation of actin filament polymerizationHOM03M000335
GO:0032956IEAPLAZA Homologyregulation of actin cytoskeleton organizationHOM03M000335
GO:0032271IEAPLAZA Homologyregulation of protein polymerizationHOM03M000335
GO:0051493IEAPLAZA Homologyregulation of cytoskeleton organizationHOM03M000335
GO:0032273IEAPLAZA Homologypositive regulation of protein polymerizationHOM03M000335
GO:0051495IEAPLAZA Homologypositive regulation of cytoskeleton organizationHOM03M000335
GO:0033043IEAPLAZA Homologyregulation of organelle organizationHOM03M000335
GO:0090066IEAPLAZA Homologyregulation of anatomical structure sizeHOM03M000335
GO:0044087IEAPLAZA Homologyregulation of cellular component biogenesisHOM03M000335
GO:0030036IEAPLAZA Homologyactin cytoskeleton organizationHOM03M000335
GO:0032535IEAPLAZA Homologyregulation of cellular component sizeHOM03M000335
GO:0031334IEAPLAZA Homologypositive regulation of protein complex assemblyHOM03M000335
GO:0032970IEAPLAZA Homologyregulation of actin filament-based processHOM03M000335
GO:0007015IEAPLAZA Homologyactin filament organizationHOM03M000335
GO:0051130IEAPLAZA Homologypositive regulation of cellular component organizationHOM03M000335
GO:0010638IEAPLAZA Homologypositive regulation of organelle organizationHOM03M000335
GO:0008064IEAPLAZA Homologyregulation of actin polymerization or depolymerizationHOM03M000335
GO:0008154IEAPLAZA Homologyactin polymerization or depolymerizationHOM03M000335
GO:0043254IEAPLAZA Homologyregulation of protein complex assemblyHOM03M000335

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003779ISSUniProtactin binding1 2 3 4 5 6 7

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISMGene Ontologyplasma membrane1
GO:0005618IDAUniProtcell wall1 2 3 4 5 6 7
GO:0005737IDAGene Ontologycytoplasm1
GO:0009524IDAUniProtphragmoplast1 2 3 4 5 6 7
GO:0005884IEAUniProtactin filament1 2 3 4 5 6
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027643Formin-like family, viridiplantae
IPR015425Formin, FH2 domain

Mapman id Description
35.1.20not assigned.no ontology.formin homology 2 domain-containing protein
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network