Gene: AT5G54250 (Arabidopsis thaliana)

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Gene Identifier
AT5G54250
Transcript Identifier
AT5G54250.1
Gene Type
Coding gene
Location
5 : 22025684-22029971 : negative

Family

Gene family
HOM03M000201
(251 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cyclic nucleotide-gated cation channel 4
Curated Summary
member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.
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Identifiers

Identifier Name
aliasATCNGC4
aliasCNGC4
aliascyclic nucleotide-gated cation channel 4
aliasDND2
aliasDEFENSE, NO DEATH 2
aliasHLM1
uniprotQ94AS9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009626IMPUniProtplant-type hypersensitive response1 2 3 4 5 6
GO:0030003RCAGene Ontologycellular cation homeostasis1
GO:0070838RCAGene Ontologydivalent metal ion transport1
GO:0055085IEAPLAZA Homologytransmembrane transportHOM03M000201
GO:0006811IEAPLAZA Homologyion transportHOM03M000201

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005261ISSGene Ontologycation channel activity1
GO:0030551ISSGene Ontologycyclic nucleotide binding1
GO:0005516TASGene Ontologycalmodulin binding1
GO:0008324IDAUniProtcation transmembrane transporter activity1 2 3 4 5 6
GO:0030552IEAUniProtcAMP binding1 2 3 4 5
GO:0030553IEAUniProtcGMP binding1 2 3 4 5
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03M000201
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03M000201
GO:0005216IEAPLAZA Homologyion channel activityHOM03M000201
GO:0015267IEAPLAZA Homologychannel activityHOM03M000201

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IEA, ISMUniProtplasma membrane1 2 3 4 5 6
GO:0016020IDAUniProtmembrane1 2 3 4 5 6
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000595Cyclic nucleotide-binding domain
IPR014710RmlC-like jelly roll fold
IPR018490Cyclic nucleotide-binding-like

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.