Gene: AT5G54230 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G54230
Transcript Identifier
AT5G54230.1
Gene Type
Coding gene
Location
5 : 22016357-22017845 : negative

Family

Gene family
HOM03M000013
(1897 genes in 16 species)
specific family

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Descriptions

Description
myb domain protein 49
Curated Summary
Encodes a putative transcription factor (MYB49).
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Identifiers

Identifier Name
aliasAtMYB49
aliasMYB49
aliasmyb domain protein 49

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0009651IEPGene Ontologyresponse to salt stress1
GO:0009737IEPGene Ontologyresponse to abscisic acid1
GO:0009751IEPGene Ontologyresponse to salicylic acid1
GO:0010089RCAGene Ontologyxylem development1
GO:0044036RCAGene Ontologycell wall macromolecule metabolic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0003682IEAInterProchromatin binding
GO:0003677IEAInterProDNA binding
GO:0005488IEAPLAZA HomologybindingHOM03M000013
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000013
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000013
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000013

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017930Myb domain
IPR001005SANT/Myb domain
IPR009057Homeodomain-like

Mapman id Description
27.3.25RNA.regulation of transcription.MYB domain transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMYB
PlantTFDBMYB