Gene: AT5G51140 (Arabidopsis thaliana)

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Gene Identifier
AT5G51140
Transcript Identifier
AT5G51140.2
Gene Type
Coding gene
Location
5 : 20784103-20786793 : negative

Family

Gene family
HOM03M006178
(17 genes in 14 species)
specific family

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Descriptions

Description
Pseudouridine synthase family protein
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Identifiers

Identifier Name
uniprotQ9LU60

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000038RCAGene Ontologyvery long-chain fatty acid metabolic process1
GO:0000394RCAGene OntologyRNA splicing, via endonucleolytic cleavage and ligation1
GO:0009086RCAGene Ontologymethionine biosynthetic process1
GO:0009409RCAGene Ontologyresponse to cold1
GO:0042335RCAGene Ontologycuticle development1
GO:0001522IEAUniProtpseudouridine synthesis1 2
GO:0009451IEAInterProRNA modification

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0009982IEA, ISS, TASUniProtpseudouridine synthase activity1 2 3 4
GO:0003723IEAUniProtRNA binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005829IDAGene Ontologycytosol1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020103Pseudouridine synthase, catalytic domain
IPR002942RNA-binding S4 domain
IPR006224Pseudouridine synthase, RluC/RluD, conserved site
IPR006145Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR006225Pseudouridine synthase, RluC/RluD

Mapman id Description
29.1.30protein.aa activation.pseudouridylate synthase
No SignalP domains detected for this gene.