Gene: AT5G50770 (Arabidopsis thaliana)

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Gene Identifier
AT5G50770
Transcript Identifier
AT5G50770.1
Gene Type
Coding gene
Location
5 : 20646790-20648696 : negative

Family

Gene family
HOM03M000595
(113 genes in 15 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
hydroxysteroid dehydrogenase 6
Curated Summary
Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.
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Identifiers

Identifier Name
aliasAtHSD6
aliashydroxysteroid dehydrogenase 6
aliasHSD6
uniprotQ9LUE4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006694IEAUniProtsteroid biosynthetic process1 2 3
GO:0008152IEAInterPrometabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEA, ISSUniProtoxidoreductase activity1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0016021IEAUniProtintegral to membrane1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002198Short-chain dehydrogenase/reductase SDR
IPR002347Glucose/ribitol dehydrogenase
IPR020904Short-chain dehydrogenase/reductase, conserved site
IPR016040NAD(P)-binding domain

Mapman id Description
26.22misc.short chain dehydrogenase/reductase (SDR)
No SignalP domains detected for this gene.