Gene: AT5G49270 (Arabidopsis thaliana)

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Gene Identifier
AT5G49270
Transcript Identifier
AT5G49270.1
Gene Type
Coding gene
Location
5 : 19972021-19974398 : negative

Family

Gene family
HOM03M001330
(56 genes in 14 species)
specific family
Subfamily
ORTHO03M005377
(6 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Curated Summary
Involved in successfully establishing tip growth in root hairs.
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Identifiers

Identifier Name
aliasMUTANT ROOT HAIR 4
aliasMRH4
aliasSHAVEN 2
aliasDEFORMED ROOT HAIRS 9
aliasSHV2
aliasCOBRA-LIKE 9
aliasCOBL9
aliasDER9
uniprotQ9FJ13

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009932IMPUniProtcell tip growth1 2 3 4
GO:0010053IMPGene Ontologyroot epidermal cell differentiation1
GO:0048765IMP, RCA, UniProtroot hair cell differentiation1 2 3 4 5
GO:0010054RCAGene Ontologytrichoblast differentiation1
GO:0048527RCAGene Ontologylateral root development1
GO:0048589RCAGene Ontologydevelopmental growth1
GO:0048767RCAGene Ontologyroot hair elongation1
GO:0010215IEAUniProtcellulose microfibril organization1 2 3
GO:0016049IEAInterProcell growth

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IEA, ISMUniProtplasma membrane1 2 3 4
GO:0031225TAS, IEA, UniProtanchored to membrane1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006918COBRA, plant

Mapman id Description
15metal handling
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network