Gene: AT5G48375 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G48375
Transcript Identifier
AT5G48375.1
Gene Type
Coding gene
Location
5 : 19601303-19603883 : negative

Family

Gene family
HOM03M000093
(496 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description
thioglucoside glucosidase 3
Curated Summary
Is a myrosinase pseudogene that codes for a truncated and frameshifted protein. Although TGG3 apparently is a pseudogene, its mRNA is expressed specifically in stamen and petal according to RT-PCR analysis. Western analysis shows no band of the size expected for a TGG3 protein.
Show more...

Identifiers

Identifier Name
aliasBETA GLUCOSIDASE 39
aliasTGG3
aliasthioglucoside glucosidase 3
aliasBGLU39
uniprotQ3E8E5

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAUniProtcarbohydrate metabolic process1 2
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000093

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553ISS, IEAGene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds1
GO:0019137IDAUniProtthioglucosidase activity1 2 3
GO:0003824IEAInterProcatalytic activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000093
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03M000093

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001360Glycoside hydrolase, family 1
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside hydrolase, superfamily

Mapman id Description
26.3misc.gluco-, galacto- and mannosidases
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network