Gene: AT5G45710 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G45710
Transcript Identifier
AT5G45710.1
Gene Type
Coding gene
Location
5 : 18541576-18542706 : positive

Family

Gene family
HOM03M000131
(358 genes in 16 species)
specific family
Subfamily
ORTHO03M024618
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
winged-helix DNA-binding transcription factor family protein
Curated Summary
member of Heat Stress Transcription Factor (Hsf) family
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Identifiers

Identifier Name
aliasROOT HANDEDNESS 1
aliasRHA1
aliasHSFA4C
aliasHEAT SHOCK TRANSCRIPTION FACTOR A4C
aliasAT-HSFA4C
uniprotQ9FK72

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009408IEP, IEA, UniProtresponse to heat1 2 3 4 5
GO:0009733IMP, RCA, UniProtresponse to auxin1 2 3 4 5 6
GO:0009958IMPUniProtpositive gravitropism1 2 3 4 5
GO:0048364IMPGene Ontologyroot development1
GO:0048527IMP, RCA, UniProtlateral root development1 2 3 4 5 6
GO:0048530IMPUniProtfruit morphogenesis1 2 3 4 5
GO:0007165RCAGene Ontologysignal transduction1
GO:0009407RCAGene Ontologytoxin catabolic process1
GO:0009414RCAGene Ontologyresponse to water deprivation1
GO:0009723RCAGene Ontologyresponse to ethylene1
GO:0009738RCAGene Ontologyabscisic acid-activated signaling pathway1
GO:0009753RCAGene Ontologyresponse to jasmonic acid1
GO:0042538RCAGene Ontologyhyperosmotic salinity response1
GO:0048193RCAGene OntologyGolgi vesicle transport1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000131
GO:0010467IEAPLAZA Homologygene expressionHOM03M000131
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000131
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000131
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000131
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000131
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000131
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000131
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000131
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000131
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000131
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000131
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000131
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000131
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000131
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000131
GO:0006950IEAPLAZA Homologyresponse to stressHOM03M000131
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000131
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000131
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000131
GO:0009628IEAPLAZA Homologyresponse to abiotic stimulusHOM03M000131
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000131
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000131
GO:0009266IEAPLAZA Homologyresponse to temperature stimulusHOM03M000131
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000131
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000131
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000131
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000131
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000131
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000131
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000131
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000131
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000131
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03M000131

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISSGene OntologyDNA binding1
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5
GO:0043565IEAUniProtsequence-specific DNA binding1 2 3 4
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000131

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000131
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000131

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000232Heat shock factor (HSF)-type, DNA-binding
IPR027709Heat shock transcription factor, plant
IPR027725Heat shock transcription factor family
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
27.3.23RNA.regulation of transcription.HSF,Heat-shock transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHSF
PlantTFDBHSF