Gene: AT5G44800 (Arabidopsis thaliana)

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Gene Identifier
AT5G44800
Transcript Identifier
AT5G44800.1
Gene Type
Coding gene
Location
5 : 18083659-18092162 : negative

Family

Gene family
HOM03M000104
(463 genes in 16 species)
specific family

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Descriptions

Description
chromatin remodeling 4
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Identifiers

Identifier Name
aliasPICKLE RELATED 1
aliasCHR4
aliasPKR1
aliaschromatin remodeling 4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006333ISSGene Ontologychromatin assembly or disassembly1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003682ISSGene Ontologychromatin binding1
GO:0004386ISS, IEAGene Ontologyhelicase activity1
GO:0005524ISS, IEAGene OntologyATP binding1
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000104
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000104
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000104
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000104
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000104
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000104
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000104
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000104
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000104
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000104
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000104
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000104
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000104
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000104
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000104

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0009506IDAGene Ontologyplasmodesma1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019786Zinc finger, PHD-type, conserved site
IPR000953Chromo domain/shadow
IPR009057Homeodomain-like
IPR023780Chromo domain
IPR009463Domain of unknown function DUF1087
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR019787Zinc finger, PHD-finger
IPR001650Helicase, C-terminal
IPR011011Zinc finger, FYVE/PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001965Zinc finger, PHD-type
IPR016197Chromo domain-like
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR000330SNF2-related

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBPHD