PLAZA 3.0 Monocots gene overview : AT5G44790

Gene: AT5G44790 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G44790
Transcript Identifier: AT5G44790.1
Gene Type: Coding gene
Location: 5 : 18075846-18079817 : negative

Family

Gene family: HOM03M000315
(179 genes in 16 species)
specific family

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Descriptions

Description: copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)

Curated Summary: ATP dependent copper transporter vital for ethylene response pathway

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Identifiers

Identifier	Name
alias	HMA7
alias	RAN1
alias	RESPONSIVE-TO-ANTAGONIST 1
uniprot	Q9S7J8

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009873	TAS, IMP, RCA	UniProt	ethylene mediated signaling pathway	1 2 3 4 5 6
GO:0009723	IMP	Gene Ontology	response to ethylene	1
GO:0010119	IMP	UniProt	regulation of stomatal movement	1 2 3 4
GO:0000041	RCA	Gene Ontology	transition metal ion transport	1
GO:0000303	RCA	Gene Ontology	response to superoxide	1
GO:0006487	RCA	Gene Ontology	protein N-linked glycosylation	1
GO:0007165	RCA	Gene Ontology	signal transduction	1
GO:0008219	RCA	Gene Ontology	cell death	1
GO:0009755	RCA	Gene Ontology	hormone-mediated signaling pathway	1
GO:0009863	RCA	Gene Ontology	salicylic acid mediated signaling pathway	1
GO:0006825	IEA	InterPro	copper ion transport
GO:0006812	IEA	InterPro	cation transport
GO:0030001	IEA	InterPro	metal ion transport

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0015662	ISS	Gene Ontology	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1
GO:0005375	IGI	UniProt	copper ion transmembrane transporter activity	1 2 3 4
GO:0005524	IEA	UniProt	ATP binding	1 2 3
GO:0019829	IEA	UniProt	cation-transporting ATPase activity	1 2 3
GO:0005507	IEA	UniProt	copper ion binding	1 2 3
GO:0000166	IEA	InterPro	nucleotide binding
GO:0046872	IEA	InterPro	metal ion binding
GO:0042626	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of substances	HOM03M000315
GO:0042625	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of ions	HOM03M000315
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000315
GO:0016820	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	HOM03M000315
GO:0015399	IEA	PLAZA Homology	primary active transmembrane transporter activity	HOM03M000315
GO:0015405	IEA	PLAZA Homology	P-P-bond-hydrolysis-driven transmembrane transporter activity	HOM03M000315
GO:0043492	IEA	PLAZA Homology	ATPase activity, coupled to movement of substances	HOM03M000315

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005794	IDA	UniProt	Golgi apparatus	1 2 3 4
GO:0005768	IDA	UniProt	endosome	1 2 3 4
GO:0005802	IDA	UniProt	trans-Golgi network	1 2 3 4
GO:0016021	IEA	UniProt	integral to membrane	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006121	Heavy metal-associated domain, HMA
IPR006122	Heavy metal-associated domain, copper ion-binding
IPR008250	P-type ATPase, A domain
IPR027256	Cation-transporting P-type ATPase, subfamily IB
IPR001757	Cation-transporting P-type ATPase
IPR017969	Heavy-metal-associated, conserved site
IPR023299	P-type ATPase, cytoplasmic domain N
IPR023214	HAD-like domain
IPR018303	P-type ATPase, phosphorylation site

Mapman id	Description
34.12	transport.metal

No SignalP domains detected for this gene.