Gene: AT5G42630 (Arabidopsis thaliana)

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Gene Identifier
AT5G42630
Transcript Identifier
AT5G42630.1
Gene Type
Coding gene
Location
5 : 17073997-17075747 : negative

Family

Gene family
HOM03M000071
(625 genes in 16 species)
specific family
Subfamily
ORTHO03M008650
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Homeodomain-like superfamily protein
Curated Summary
Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.
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Identifiers

Identifier Name
aliasKANADI 4
aliasKAN4
aliasATS
aliasABERRANT TESTA SHAPE
uniprotQ9FJV5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IMP, TASGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0048481IMPGene Ontologyovule development1
GO:0080060IMP, IGIUniProtintegument development1 2 3 4 5 6 7 8
GO:0030154IEAUniProtcell differentiation1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7
GO:0044212IDAUniProttranscription regulatory region DNA binding1 2 3 4 5 6 7
GO:0003682IEAUniProtchromatin binding1 2 3 4 5 6
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000071
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000071
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000071

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8
GO:0005618IDAUniProtcell wall1 2 3 4 5 6 7

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR009057Homeodomain-like
IPR006447Myb domain, plants

Mapman id Description
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP
27.3.25RNA.regulation of transcription.MYB domain transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBG2-like
PlantTFDBG2-like