Gene: AT5G42400 (Arabidopsis thaliana)

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Gene Identifier
AT5G42400
Transcript Identifier
AT5G42400.1
Gene Type
Coding gene
Location
5 : 16954469-16960671 : negative

Family

Gene family
HOM03M000312
(180 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
SET domain protein 25
Curated Summary
Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C.
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Identifiers

Identifier Name
aliasATXR7
aliasSET domain protein 25
aliasSDG25
aliasARABIDOPSIS TRITHORAX-RELATED7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010228IMPGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0010452IDAGene Ontologyhistone H3-K36 methylation1
GO:0051568IGI, ISSGene Ontologyhistone H3-K4 methylation1 2
GO:0009909IMPGene Ontologyregulation of flower development1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0043167IEAPLAZA Homologyion bindingHOM03M000312

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2
GO:0005737IDAGene Ontologycytoplasm1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003169GYF
IPR001214SET domain

Mapman id Description
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSET