PLAZA 3.0 Monocots gene overview : AT5G41760

Gene: AT5G41760 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G41760
Transcript Identifier: AT5G41760.1
Gene Type: Coding gene
Location: 5 : 16706978-16709204 : positive

Family

Gene family: HOM03M000913
(78 genes in 15 species)
specific family
Subfamily: ORTHO03M016338
(3 genes in 3 species)
specific family

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Descriptions

Description: Nucleotide-sugar transporter family protein

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Identifiers

Identifier	Name
uniprot	Q8LGE9

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0015780	IEA, ISS	UniProt	nucleotide-sugar transport	1 2 3 4 5 6
GO:0055085	IDA, ISS	Gene Ontology	transmembrane transport	1 2
GO:0015739	IDA	UniProt	sialic acid transport	1 2 3 4 5 6
GO:0000394	RCA	Gene Ontology	RNA splicing, via endonucleolytic cleavage and ligation	1
GO:0009086	RCA	Gene Ontology	methionine biosynthetic process	1
GO:0008643	IEA	InterPro	carbohydrate transport

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005338	IEA, ISS	UniProt	nucleotide-sugar transmembrane transporter activity	1 2 3 4 5 6
GO:0005456	ISS	Gene Ontology	CMP-N-acetylneuraminate transmembrane transporter activity	1
GO:0015136	IDA	UniProt	sialic acid transmembrane transporter activity	1 2 3 4 5 6
GO:0005351	IEA	UniProt	sugar:hydrogen symporter activity	1 2 3 4 5
GO:0005402	IEA	PLAZA Homology	cation:sugar symporter activity	HOM03M000913

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	ISM	Gene Ontology	chloroplast	1
GO:0000139	IEA	UniProt	Golgi membrane	1 2 3 4 5
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4 5

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR007271	Nucleotide-sugar transporter
IPR004689	UDP-galactose transporter

Mapman id	Description
34.2	transport.sugars

SignalP	Description
SignalP-TM	Signal Peptide detected using TM network