Gene: AT5G40840 (Arabidopsis thaliana)

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Gene Identifier
AT5G40840
Transcript Identifier
AT5G40840.2
Gene Type
Coding gene
Location
5 : 16359611-16363722 : negative

Family

Gene family
HOM03M001549
(50 genes in 16 species)
specific family

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Descriptions

Description
Rad21/Rec8-like family protein
Curated Summary
Cohesion family protein SYN2 (SYN2).
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Identifiers

Identifier Name
aliasSister chromatid cohesion 1 (SCC1) protein homolog 2
aliasSYN2
aliasAtRAD21.1
uniprotQ9FQ20

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007067IEP, RCA, UniProtmitosis1 2 3 4
GO:0006302IMP, RCA, UniProtdouble-strand break repair1 2 3 4
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0000724RCAGene Ontologydouble-strand break repair via homologous recombination1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006261RCAGene OntologyDNA-dependent DNA replication1
GO:0006275RCAGene Ontologyregulation of DNA replication1
GO:0006306RCAGene OntologyDNA methylation1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0007129RCAGene Ontologysynapsis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0009555RCAGene Ontologypollen development1
GO:0009560RCAGene Ontologyembryo sac egg cell differentiation1
GO:0010212RCAGene Ontologyresponse to ionizing radiation1
GO:0010332RCAGene Ontologyresponse to gamma radiation1
GO:0010564RCAGene Ontologyregulation of cell cycle process1
GO:0016444RCAGene Ontologysomatic cell DNA recombination1
GO:0016568RCAGene Ontologychromatin modification1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0051726RCAGene Ontologyregulation of cell cycle1
GO:0051301IEAUniProtcell division1 2
GO:0007059IEAUniProtchromosome segregation1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, ISSGene Ontologynucleus1 2
GO:0000798ISSUniProtnuclear cohesin complex1 2 3
GO:0000228IEAInterPronuclear chromosome

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006910Rad21/Rec8-like protein, N-terminal
IPR023093Rad21/Rec8-like protein, C-terminal
IPR006909Rad21/Rec8-like protein, C-terminal, eukaryotic

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.