PLAZA 3.0 Monocots gene overview : AT5G40280

Gene: AT5G40280 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G40280
Transcript Identifier: AT5G40280.1
Gene Type: Coding gene
Location: 5 : 16101391-16104783 : positive

Family

Gene family: HOM03M005784
(18 genes in 16 species)
specific family

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Descriptions

Description: Prenyltransferase family protein

Curated Summary: encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.

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Identifiers

Identifier	Name
alias	ENHANCED RESPONSE TO ABA 1
alias	ARABIDOPSIS THALIANA FARNESYL TRANSFERASE BETA SUBUNIT
alias	ERA1
alias	WIG
alias	WIGGUM
alias	ATFTB
uniprot	Q38920

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0018342	IMP	UniProt	protein prenylation	1 2 3 4
GO:0009414	IMP	UniProt	response to water deprivation	1 2 3 4
GO:0009788	IMP	UniProt	negative regulation of abscisic acid-activated signaling pathway	1 2 3 4
GO:0006635	RCA	Gene Ontology	fatty acid beta-oxidation	1
GO:0016558	RCA	Gene Ontology	protein import into peroxisome matrix	1
GO:0009737	IMP	UniProt	response to abscisic acid	1 2 3 4
GO:0009934	IMP	UniProt	regulation of meristem structural organization	1 2 3 4
GO:0018343	IEA	UniProt	protein farnesylation	1 2 3
GO:0042127	IEA	UniProt	regulation of cell proliferation	1 2 3

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004660	IEA, IMP	UniProt	protein farnesyltransferase activity	1 2 3 4
GO:0005515	IPI	Gene Ontology	protein binding	1
GO:0004311	ISS	UniProt	farnesyltranstransferase activity	1 2 3 4
GO:0046872	IEA	UniProt	metal ion binding	1 2 3
GO:0003824	IEA	InterPro	catalytic activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005965	IEA, IMP	UniProt	protein farnesyltransferase complex	1 2 3 4

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Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001330	Prenyltransferase/squalene oxidase
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR026872	Protein farnesyltransferase subunit beta

Mapman id	Description
29.4	protein.postranslational modification

No SignalP domains detected for this gene.