Gene: AT5G39040 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G39040
Transcript Identifier
AT5G39040.1
Gene Type
Coding gene
Location
5 : 15625660-15629621 : positive

Family

Gene family
HOM03M000080
(564 genes in 16 species)
specific family
Subfamily
ORTHO03M008646
(5 genes in 5 species)
specific family

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Descriptions

Description
transporter associated with antigen processing protein 2
Curated Summary
Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.
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Identifiers

Identifier Name
aliasABCB27
aliastransporter associated with antigen processing protein 2
aliasARABIDOPSIS THALIANA TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2
aliasAtALS1
aliasALUMINUM SENSITIVE 1
aliasALS1
aliasATTAP2
aliasATP-binding cassette B27
aliasTAP2
uniprotQ0WML0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006200IBAGene OntologyATP catabolic process1
GO:0035672IBAGene Ontologyoligopeptide transmembrane transport1
GO:0055085IBA, IEAGene Ontologytransmembrane transport1
GO:0010044IMPUniProtresponse to aluminum ion1 2 3 4 5 6
GO:0006810IEAInterProtransport
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03M000080
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03M000080
GO:0051179IEAPLAZA HomologylocalizationHOM03M000080

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSGene Ontologytransporter activity1
GO:0015421IBAUniProtoligopeptide-transporting ATPase activity1 2 3 4 5 6
GO:0042626ISS, IEAGene OntologyATPase activity, coupled to transmembrane movement of substances1
GO:0005524IEAUniProtATP binding1 2 3 4 5
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0016887IEAInterProATPase activity
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000080
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000080
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000080
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000080
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03M000080
GO:0043167IEAPLAZA Homologyion bindingHOM03M000080
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000080
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000080
GO:0022804IEAPLAZA Homologyactive transmembrane transporter activityHOM03M000080
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000080
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000080
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000080
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000080
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000080
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000080
GO:0016820IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substancesHOM03M000080
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000080
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000080
GO:0015399IEAPLAZA Homologyprimary active transmembrane transporter activityHOM03M000080
GO:0015405IEAPLAZA HomologyP-P-bond-hydrolysis-driven transmembrane transporter activityHOM03M000080
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03M000080
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000080
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000080
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000080
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000080
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000080
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000080
GO:0043492IEAPLAZA HomologyATPase activity, coupled to movement of substancesHOM03M000080

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IBA, ISM, UniProtplasma membrane1 2 3 4 5 6 7
GO:0016021IBA, IEA, UniProtintegral to membrane1 2 3 4 5 6
GO:0005773IDAGene Ontologyvacuole1
GO:0000325IDAUniProtplant-type vacuole1 2 3 4 5 6
GO:0005774IDAUniProtvacuolar membrane1 2 3 4 5 6
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03M000080
GO:0016020IEAPLAZA HomologymembraneHOM03M000080
GO:0044425IEAPLAZA Homologymembrane partHOM03M000080

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017871ABC transporter, conserved site
IPR011527ABC transporter type 1, transmembrane domain
IPR001140ABC transporter, transmembrane domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003593AAA+ ATPase domain
IPR003439ABC transporter-like

Mapman id Description
34.16transport.ABC transporters and multidrug resistance systems
No SignalP domains detected for this gene.