Gene: AT5G38420 (Arabidopsis thaliana)

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Gene Identifier
AT5G38420
Transcript Identifier
AT5G38420.1
Gene Type
Coding gene
Location
5 : 15381203-15381978 : negative

Family

Gene family
HOM03M000790
(89 genes in 16 species)
specific family
Subfamily
ORTHO03M013174
(3 genes in 1 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
Ribulose bisphosphate carboxylase (small chain) family protein
Curated Summary
Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).
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Identifiers

Identifier Name
aliasRBCS2B
aliasRubisco small subunit 2B
uniprotP10797

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015977ISSGene Ontologycarbon fixation1
GO:0009637IEPUniProtresponse to blue light1 2 3 4
GO:0010114IEPUniProtresponse to red light1 2 3 4
GO:0010218IEPUniProtresponse to far red light1 2 3 4
GO:0009853IEAUniProtphotorespiration1 2 3
GO:0019253IEAUniProtreductive pentose-phosphate cycle1 2 3
GO:0015979ISOPLAZA Integrative OrthologyphotosynthesisAT5G38410
GO:0080158ISOPLAZA Integrative Orthologychloroplast ribulose bisphosphate carboxylase complex biogenesisAT5G38410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016984IEA, ISSUniProtribulose-bisphosphate carboxylase activity1 2 3 4
GO:0004497IEAUniProtmonooxygenase activity1 2 3

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009573ISSGene Ontologychloroplast ribulose bisphosphate carboxylase complex1
GO:0009941IDAUniProtchloroplast envelope1 2 3 4
GO:0022626IDAUniProtcytosolic ribosome1 2 3 4
GO:0009570IDAUniProtchloroplast stroma1 2 3 4
GO:0009579IDAUniProtthylakoid1 2 3 4
GO:0016020IDAUniProtmembrane1 2 3 4
GO:0048046IDAUniProtapoplast1 2 3 4
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G38410

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR024681Ribulose bisphosphate carboxylase, small chain
IPR000894Ribulose bisphosphate carboxylase small chain, domain
IPR024680Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal

Mapman id Description
1.3.2PS.calvin cycle.rubisco small subunit
No SignalP domains detected for this gene.