PLAZA 3.0 Monocots gene overview : AT5G27460

Gene: AT5G27460 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G27460
Transcript Identifier: AT5G27460.1
Gene Type: Coding gene
Location: 5 : 9693262-9694815 : negative

Family

Gene family: HOM03M000277
(196 genes in 14 species)
specific family
Subfamily: ORTHO03M006569
(6 genes in 6 species)
specific family

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Descriptions

Description: Tetratricopeptide repeat (TPR)-like superfamily protein

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Identifiers

Identifier	Name
uniprot	Q3E911

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Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	ISM	Gene Ontology	mitochondrion	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical

Mapman id	Description
27.3.67	RNA.regulation of transcription.putative transcription regulator

No SignalP domains detected for this gene.