Gene: AT5G24850 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G24850
- Transcript Identifier
- AT5G24850.1
- Gene Type
- Coding gene
- Location
- 5 : 8535399-8538016 : negative
Family
- Gene family
Descriptions
- Description
-
cryptochrome 3
- Curated Summary
-
Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.
Identifiers
Identifier | Name |
---|---|
alias | cryptochrome 3 |
alias | CRY3 |
uniprot | Q84KJ5 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006281 | IEA, ISS | UniProt | DNA repair | 1 2 3 4 5 6 7 8 |
GO:0009744 | RCA | Gene Ontology | response to sucrose | 1 |
GO:0009813 | RCA | Gene Ontology | flavonoid biosynthetic process | 1 |
GO:0010224 | RCA | Gene Ontology | response to UV-B | 1 |
GO:0018298 | IEA | UniProt | protein-chromophore linkage | 1 2 3 4 5 6 7 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003913 | IEA, IDA, ISS | UniProt | DNA photolyase activity | 1 2 3 4 5 6 7 8 9 |
GO:0003677 | IEA, IDA | UniProt | DNA binding | 1 2 3 4 5 6 7 8 |
GO:0010181 | IDA | Gene Ontology | FMN binding | 1 |
GO:0005524 | IEA | UniProt | ATP binding | 1 2 3 4 5 6 7 |
GO:0009881 | IEA | UniProt | photoreceptor activity | 1 2 3 4 5 6 7 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009507 | IEA, IDA, ISM | UniProt | chloroplast | 1 2 3 4 5 6 7 8 9 |
GO:0005739 | IEA, IDA | UniProt | mitochondrion | 1 2 3 4 5 6 7 8 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
28.2 | DNA.repair |
No SignalP domains detected for this gene.