Gene: AT5G20730 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G20730
Transcript Identifier
AT5G20730.1
Gene Type
Coding gene
Location
5 : 7016704-7021504 : negative

Family

Gene family
HOM03M000112
(417 genes in 15 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
Curated Summary
Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.
Show more...

Identifiers

Identifier Name
aliasIAA25
aliasIAA21
aliasindole-3-acetic acid inducible 23
aliasindole-3-acetic acid inducible 21
aliasMSG1
aliasMASSUGU 1
aliasTRANSPORT INHIBITOR RESPONSE 5
aliasTIR5
aliasBIP
aliasIAA23
aliasindole-3-acetic acid inducible 25
aliasAUXIN RESPONSE FACTOR 7
aliasARF7
aliasNON-PHOTOTROPHIC HYPOCOTYL
aliasNPH4
aliasBIPOSTO
uniprotP93022

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEA, TASUniProtregulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009638IMPUniProtphototropism1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009785IMPUniProtblue light signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009733IMP, RCA, UniProtresponse to auxin1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0040008TASGene Ontologyregulation of growth1
GO:0009630TAS, RCAUniProtgravitropism1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0045893IMPUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048366IGIUniProtleaf development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048527IGI, RCAGene Ontologylateral root development1 2
GO:0009723IGIUniProtresponse to ethylene1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010311IGIUniProtlateral root formation1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009741RCAGene Ontologyresponse to brassinosteroid1
GO:0009734IEAUniProtauxin mediated signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0007275IEAUniProtmulticellular organismal development1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009725IEAInterProresponse to hormone
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000112
GO:0010467IEAPLAZA Homologygene expressionHOM03M000112
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000112
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000112
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000112
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000112
GO:0042221IEAPLAZA Homologyresponse to chemicalHOM03M000112
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000112
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000112
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000112
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000112
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000112
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000112
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000112
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000112
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000112
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000112
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000112
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000112
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000112
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000112
GO:0009719IEAPLAZA Homologyresponse to endogenous stimulusHOM03M000112
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000112
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000112
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000112
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000112
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000112
GO:0010033IEAPLAZA Homologyresponse to organic substanceHOM03M000112
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000112
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000112
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000112
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000112
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000112
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000112
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000112
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000112
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000112
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000112
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000112
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03M000112

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005515IPIGene Ontologyprotein binding1
GO:0003677IDA, IEA, UniProtDNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0046983IEAInterProprotein dimerization activity
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000112

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMIEA, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000112
GO:0043226IEAPLAZA HomologyorganelleHOM03M000112
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000112
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03M000112

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011525Aux/IAA-ARF-dimerisation
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain
IPR010525Auxin response factor
IPR003311AUX/IAA protein

Mapman id Description
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBARF
PlantTFDBARF