PLAZA 3.0 Monocots gene overview : AT5G19320

Gene: AT5G19320 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G19320
Transcript Identifier: AT5G19320.1
Gene Type: Coding gene
Location: 5 : 6505310-6506947 : negative

Family

Gene family: HOM03M001963
(41 genes in 16 species)
specific family
Subfamily: ORTHO03M015239
(3 genes in 2 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: RAN GTPase activating protein 2

Curated Summary: Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.

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Identifiers

Identifier	Name
alias	RAN GTPase activating protein 2
alias	RANGAP2
uniprot	Q9M651

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006913	TAS, RCA	UniProt	nucleocytoplasmic transport	1 2 3 4 5 6 7
GO:0009651	IEP	UniProt	response to salt stress	1 2 3 4 5 6
GO:0009407	RCA	Gene Ontology	toxin catabolic process	1
GO:0009640	RCA	Gene Ontology	photomorphogenesis	1
GO:0010388	RCA	Gene Ontology	cullin deneddylation	1
GO:0048527	RCA	Gene Ontology	lateral root development	1
GO:0043547	IEA	UniProt	positive regulation of GTPase activity	1 2 3 4 5

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005098	ISS	Gene Ontology	Ran GTPase activator activity	1
GO:0005096	IEA	UniProt	GTPase activator activity	1 2 3 4 5

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	IDA, ISM,	UniProt	chloroplast	1 2 3 4 5 6 7
GO:0005635	IDA	UniProt	nuclear envelope	1 2 3 4 5 6
GO:0005783	IDA	UniProt	endoplasmic reticulum	1 2 3 4 5 6
GO:0005774	IDA	UniProt	vacuolar membrane	1 2 3 4 5 6
GO:0031965	IEA	UniProt	nuclear membrane	1 2 3 4 5
GO:0009524	IEA	UniProt	phragmoplast	1 2 3 4 5
GO:0005819	IEA	UniProt	spindle	1 2 3 4 5

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003590	Leucine-rich repeat, ribonuclease inhibitor subtype
IPR025265	WPP domain

Mapman id	Description
30.5	signalling.G-proteins

No SignalP domains detected for this gene.