Gene: AT5G19200 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G19200
Transcript Identifier
AT5G19200.1
Gene Type
Coding gene
Location
5 : 6458995-6460690 : positive

Family

Gene family
HOM03M002957
(29 genes in 15 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
NAD(P)-binding Rossmann-fold superfamily protein
Curated Summary
Encodes one of the Arabidopsis proteins (At3g06060/TSC10A and At5g19200/TSC10B) with significant similarity to the yeast 3-ketodihydrosphinganine (3-KDS) reductase, Tsc10p. Both TSC10A and TSC10B are bona fide 3-KDS reductase as shown by complementation experiment in yeast.
Show more...

Identifiers

Identifier Name
aliasTSC10B

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030148IMPGene Ontologysphingolipid biosynthetic process1
GO:0008152IEAInterPrometabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491ISS, IEAGene Ontologyoxidoreductase activity1
GO:0047560IDAGene Ontology3-dehydrosphinganine reductase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISMGene Ontologychloroplast1
GO:0005789IDAGene Ontologyendoplasmic reticulum membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020904Short-chain dehydrogenase/reductase, conserved site
IPR016040NAD(P)-binding domain
IPR002347Glucose/ribitol dehydrogenase
IPR002198Short-chain dehydrogenase/reductase SDR

Mapman id Description
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids
No SignalP domains detected for this gene.