Gene: AT5G19020 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G19020
- Transcript Identifier
- AT5G19020.1
- Gene Type
- Coding gene
- Location
- 5 : 6352771-6354828 : negative
Family
- Gene family
Descriptions
- Description
-
mitochondrial editing factor 18
- Curated Summary
-
Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.
Identifiers
Identifier | Name |
---|---|
alias | MEF18 |
alias | mitochondrial editing factor 18 |
uniprot | P0C8Q8 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0080156 | IMP | Gene Ontology | mitochondrial mRNA modification | 1 |
GO:0009410 | RCA | Gene Ontology | response to xenobiotic stimulus | 1 |
GO:0009560 | RCA | Gene Ontology | embryo sac egg cell differentiation | 1 |
GO:0048522 | RCA | Gene Ontology | positive regulation of cellular process | 1 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03M000001 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005739 | IEA, ISM | UniProt | mitochondrion | 1 2 3 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
35.1.5 | not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein |
No SignalP domains detected for this gene.