PLAZA 3.0 Monocots gene overview : AT5G18700

Gene: AT5G18700 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G18700
Transcript Identifier: AT5G18700.1
Gene Type: Coding gene
Location: 5 : 6235387-6240733 : negative

Family

Gene family: HOM03M000079
(579 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description: Protein kinase family protein with ARM repeat domain

Curated Summary: Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo. Required for cell plate expansion in cytokinesis.

Identifiers

Identifier	Name
alias	RUK
alias	RUNKEL
alias	EMB3013
alias	EMBRYO DEFECTIVE 3013

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009793	NAS	Gene Ontology	embryo development ending in seed dormancy	1
GO:0000910	IMP	Gene Ontology	cytokinesis	1
GO:0010342	IMP	Gene Ontology	endosperm cellularization	1
GO:0000914	IMP	Gene Ontology	phragmoplast assembly	1
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0044260	IEA	PLAZA Homology	cellular macromolecule metabolic process	HOM03M000079
GO:0006796	IEA	PLAZA Homology	phosphate-containing compound metabolic process	HOM03M000079
GO:0006793	IEA	PLAZA Homology	phosphorus metabolic process	HOM03M000079
GO:0043170	IEA	PLAZA Homology	macromolecule metabolic process	HOM03M000079
GO:0044237	IEA	PLAZA Homology	cellular metabolic process	HOM03M000079
GO:0044238	IEA	PLAZA Homology	primary metabolic process	HOM03M000079
GO:0016310	IEA	PLAZA Homology	phosphorylation	HOM03M000079
GO:0043412	IEA	PLAZA Homology	macromolecule modification	HOM03M000079
GO:0071704	IEA	PLAZA Homology	organic substance metabolic process	HOM03M000079
GO:0044267	IEA	PLAZA Homology	cellular protein metabolic process	HOM03M000079
GO:0019538	IEA	PLAZA Homology	protein metabolic process	HOM03M000079
GO:0036211	IEA	PLAZA Homology	protein modification process	HOM03M000079
GO:0006464	IEA	PLAZA Homology	cellular protein modification process	HOM03M000079

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016301	ISS	Gene Ontology	kinase activity	1
GO:0008017	IDA	Gene Ontology	microtubule binding	1
GO:0004672	IEA	InterPro	protein kinase activity
GO:0004674	IEA	InterPro	protein serine/threonine kinase activity
GO:0005488	IEA	InterPro	binding
GO:0005524	IEA	InterPro	ATP binding
GO:0016772	IEA	InterPro	transferase activity, transferring phosphorus-containing groups
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03M000079
GO:0043168	IEA	PLAZA Homology	anion binding	HOM03M000079
GO:0032553	IEA	PLAZA Homology	ribonucleotide binding	HOM03M000079
GO:0043167	IEA	PLAZA Homology	ion binding	HOM03M000079
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000079
GO:0097367	IEA	PLAZA Homology	carbohydrate derivative binding	HOM03M000079
GO:0032559	IEA	PLAZA Homology	adenyl ribonucleotide binding	HOM03M000079
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000079
GO:0000166	IEA	PLAZA Homology	nucleotide binding	HOM03M000079
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03M000079
GO:0030554	IEA	PLAZA Homology	adenyl nucleotide binding	HOM03M000079
GO:0016773	IEA	PLAZA Homology	phosphotransferase activity, alcohol group as acceptor	HOM03M000079
GO:0017076	IEA	PLAZA Homology	purine nucleotide binding	HOM03M000079
GO:0097159	IEA	PLAZA Homology	organic cyclic compound binding	HOM03M000079
GO:0036094	IEA	PLAZA Homology	small molecule binding	HOM03M000079
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03M000079
GO:1901363	IEA	PLAZA Homology	heterocyclic compound binding	HOM03M000079
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03M000079
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03M000079
GO:0016740	IEA	PLAZA Homology	transferase activity	HOM03M000079

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	ISM	Gene Ontology	plasma membrane	1
GO:0009506	IDA	Gene Ontology	plasmodesma	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR011989	Armadillo-like helical
IPR000719	Protein kinase domain
IPR016024	Armadillo-type fold
IPR011009	Protein kinase-like domain
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site

Mapman id	Description
29.4	protein.postranslational modification

No SignalP domains detected for this gene.