PLAZA 3.0 Monocots gene overview : AT5G17770

Gene: AT5G17770 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G17770
Transcript Identifier: AT5G17770.1
Gene Type: Coding gene
Location: 5 : 5864543-5866495 : negative

Family

Gene family: HOM03M000580
(115 genes in 16 species)
specific family
Subfamily: ORTHO03M004839
(7 genes in 7 species)
specific family

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Descriptions

Description: NADH:cytochrome B5 reductase 1

Curated Summary: Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.

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Identifiers

Identifier	Name
alias	ATCBR
alias	CBR
alias	CBR1
alias	NADH:CYTOCHROME B5 REDUCTASE 1
alias	NADH:cytochrome B5 reductase 1
uniprot	Q9ZNT1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006499	RCA	Gene Ontology	N-terminal protein myristoylation	1
GO:0042732	RCA	Gene Ontology	D-xylose metabolic process	1
GO:0022900	IDA	UniProt	electron transport chain	1 2 3 4 5 6 7
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004128	IDA	UniProt	cytochrome-b5 reductase activity, acting on NAD(P)H	1 2 3 4 5 6 7
GO:0016491	IEA	InterPro	oxidoreductase activity
GO:0009055	IEA	PLAZA Homology	electron carrier activity	HOM03M000580
GO:0030151	IEA	PLAZA Homology	molybdenum ion binding	HOM03M000580

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISM	Gene Ontology	cytoplasm	1
GO:0009505	IDA	UniProt	plant-type cell wall	1 2 3 4 5 6 7
GO:0005783	IDA	UniProt	endoplasmic reticulum	1 2 3 4 5 6 7
GO:0005886	IDA	UniProt	plasma membrane	1 2 3 4 5 6 7
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4 5 6
GO:0005741	IEA	UniProt	mitochondrial outer membrane	1 2 3 4 5 6

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR017938	Riboflavin synthase-like beta-barrel
IPR001834	NADH:cytochrome b5 reductase (CBR)
IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase
IPR001433	Oxidoreductase FAD/NAD(P)-binding
IPR017927	Ferredoxin reductase-type FAD-binding domain
IPR008333	Oxidoreductase, FAD-binding domain

Mapman id	Description
21.99	redox.misc

No SignalP domains detected for this gene.