Gene: AT5G17300 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G17300
- Transcript Identifier
- AT5G17300.1
- Gene Type
- Coding gene
- Location
- 5 : 5690435-5692435 : negative
Family
- Gene family
Descriptions
- Description
-
Homeodomain-like superfamily protein
- Curated Summary
-
Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.
Identifiers
Identifier | Name |
---|---|
alias | RVE1 |
alias | REVEILLE 1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006355 | RCA, TAS | Gene Ontology | regulation of transcription, DNA-dependent | 1 2 |
GO:0007623 | IEP, RCA | Gene Ontology | circadian rhythm | 1 2 |
GO:0009734 | IMP | Gene Ontology | auxin mediated signaling pathway | 1 |
GO:0009851 | IMP | Gene Ontology | auxin biosynthetic process | 1 |
GO:0010600 | IMP | Gene Ontology | regulation of auxin biosynthetic process | 1 |
GO:0009651 | RCA | Gene Ontology | response to salt stress | 1 |
GO:0009723 | RCA | Gene Ontology | response to ethylene | 1 |
GO:0009733 | RCA | Gene Ontology | response to auxin | 1 |
GO:0009737 | RCA | Gene Ontology | response to abscisic acid | 1 |
GO:0009739 | RCA | Gene Ontology | response to gibberellin stimulus | 1 |
GO:0009751 | RCA | Gene Ontology | response to salicylic acid | 1 |
GO:0009753 | RCA | Gene Ontology | response to jasmonic acid | 1 |
GO:0048574 | RCA | Gene Ontology | long-day photoperiodism, flowering | 1 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003700 | IMP, ISS | Gene Ontology | sequence-specific DNA binding transcription factor activity | 1 2 |
GO:0003677 | IDA, IEA | Gene Ontology | DNA binding | 1 |
GO:0003682 | IEA | InterPro | chromatin binding |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | ISM | Gene Ontology | nucleus | 1 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
27.3.26 | RNA.regulation of transcription.MYB-related transcription factor family |
No SignalP domains detected for this gene.
Database | Type |
---|---|
PlnTFDB | MYB-related |
PlantTFDB | MYB_related |