Gene: AT5G16715 (Arabidopsis thaliana)

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Gene Identifier
AT5G16715
Transcript Identifier
AT5G16715.1
Gene Type
Coding gene
Location
5 : 5485353-5493229 : positive

Family

Gene family
HOM03M001163
(63 genes in 16 species)
specific family

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Descriptions

Description
ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases
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Identifiers

Identifier Name
aliasEMB2247
aliasembryo defective 2247

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418ISS, IEAGene OntologytRNA aminoacylation for protein translation1
GO:0009793IMP, NAS, RCAGene Ontologyembryo development ending in seed dormancy1 2 3
GO:0006364RCAGene OntologyrRNA processing1
GO:0006399RCAGene OntologytRNA metabolic process1
GO:0009658RCAGene Ontologychloroplast organization1
GO:0010027RCAGene Ontologythylakoid membrane organization1
GO:0010103RCAGene Ontologystomatal complex morphogenesis1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0016226RCAGene Ontologyiron-sulfur cluster assembly1
GO:0016556RCAGene OntologymRNA modification1
GO:0045036RCAGene Ontologyprotein targeting to chloroplast1
GO:0048481RCAGene Ontologyovule development1
GO:0006438IEAInterProvalyl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004812ISS, IEAGene Ontologyaminoacyl-tRNA ligase activity1
GO:0005524ISS, IEAGene OntologyATP binding1
GO:0004832IEAInterProvaline-tRNA ligase activity
GO:0002161IEAInterProaminoacyl-tRNA editing activity
GO:0000166IEAInterPronucleotide binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISM, IEAGene Ontologycytoplasm1
GO:0009507IDAGene Ontologychloroplast1
GO:0009570IDAGene Ontologychloroplast stroma1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR002303Valine-tRNA ligase
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR019499Valyl-tRNA synthetase, tRNA-binding arm
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR010978tRNA-binding arm
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR002300Aminoacyl-tRNA synthetase, class Ia

Mapman id Description
29.1.9protein.aa activation.valine-tRNA ligase
No SignalP domains detected for this gene.