Gene: AT5G15920 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G15920
Transcript Identifier
AT5G15920.1
Gene Type
Coding gene
Location
5 : 5196210-5199559 : positive

Family

Gene family
HOM03M005109
(19 genes in 16 species)
specific family

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Descriptions

Description
structural maintenance of chromosomes 5
Curated Summary
Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.
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Identifiers

Identifier Name
aliasstructural maintenance of chromosomes 5
aliasSMC5
aliasEMB2782
aliasEMBRYO DEFECTIVE 2782
uniprotQ9LFS8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007059ISSGene Ontologychromosome segregation1
GO:0007062IMPUniProtsister chromatid cohesion1 2 3 4
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0051607RCAGene Ontologydefense response to virus1
GO:0000724IEAUniProtdouble-strand break repair via homologous recombination1 2 3
GO:0006281IEAInterProDNA repair
GO:0000725IEAPLAZA Homologyrecombinational repairHOM03M005109

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524ISSGene OntologyATP binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, ISSGene Ontologynucleus1 2
GO:0009506IDAUniProtplasmodesma1 2 3 4
GO:0030915IEAUniProtSmc5-Smc6 complex1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR027131Structural maintenance of chromosomes protein 5
IPR003395RecF/RecN/SMC, N-terminal

Mapman id Description
31.2cell.division
No SignalP domains detected for this gene.