Gene: AT5G13650 (Arabidopsis thaliana)

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Gene Identifier
AT5G13650
Transcript Identifier
AT5G13650.2
Gene Type
Coding gene
Location
5 : 4397821-4402364 : positive

Family

Gene family
HOM03M002037
(40 genes in 16 species)
specific family

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Descriptions

Description
elongation factor family protein
Curated Summary
Encodes SVR3, a putative chloroplast TypA translation elongation GTPase. Loss of SVR3 suppresses variegation mediated by var2. SVR3 is essential for plants? ability to develop functional chloroplasts under chilling stress (8C), but not at normal temperature (22C).
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Identifiers

Identifier Name
aliasSVR3
aliasSUPPRESSOR OF VARIEGATION 3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031425IMPGene Ontologychloroplast RNA processing1
GO:0000302IMPGene Ontologyresponse to reactive oxygen species1
GO:0010468IMPGene Ontologyregulation of gene expression1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003746ISSGene Ontologytranslation elongation factor activity1
GO:0005525ISS, IEAGene OntologyGTP binding1
GO:0003924IEAInterProGTPase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISMGene Ontologyplasma membrane1
GO:0009570IDAGene Ontologychloroplast stroma1
GO:0009507IDAGene Ontologychloroplast1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000640Translation elongation factor EFG, V domain
IPR006298GTP-binding protein TypA
IPR004161Translation elongation factor EFTu/EF1A, domain 2
IPR000795Elongation factor, GTP-binding domain
IPR005225Small GTP-binding protein domain
IPR009022Elongation factor G, III-V domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR009000Translation protein, beta-barrel domain

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.