Gene: AT5G12870 (Arabidopsis thaliana)

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Gene Identifier
AT5G12870
Transcript Identifier
AT5G12870.1
Gene Type
Coding gene
Location
5 : 4062939-4064939 : negative

Family

Gene family
HOM03M000013
(1897 genes in 16 species)
specific family
Subfamily
ORTHO03M024531
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
myb domain protein 46
Curated Summary
Encodes MYB46, member of the R2R3 factor gene family. Modulates Disease Susceptibility to Botrytis cinerea.
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Identifiers

Identifier Name
aliasATMYB46
aliasMYB DOMAIN PROTEIN 46
aliasMYB46
aliasmyb domain protein 46
uniprotQ9LXV2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISSGene Ontologyregulation of transcription, DNA-dependent1
GO:0009751IEPUniProtresponse to salicylic acid1 2 3 4 5 6 7 8
GO:0009834IMPUniProtsecondary cell wall biogenesis1 2 3 4 5 6 7 8
GO:0050832IMPUniProtdefense response to fungus1 2 3 4 5 6 7 8
GO:0045893IDAUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8
GO:2000652IMPGene Ontologyregulation of secondary cell wall biogenesis1
GO:0009832RCAGene Ontologyplant-type cell wall biogenesis1
GO:0010413RCAGene Ontologyglucuronoxylan metabolic process1
GO:0045492RCAGene Ontologyxylan biosynthetic process1
GO:1901348IMPUniProtpositive regulation of secondary cell wall biogenesis1 2 3 4 5 6 7 8
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8
GO:0003700IDA, ISS, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9
GO:0003682IEAUniProtchromatin binding1 2 3 4 5 6 7
GO:0005488IEAPLAZA HomologybindingHOM03M000013
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000013
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000013
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000013

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR017930Myb domain
IPR001005SANT/Myb domain

Mapman id Description
27.3.25RNA.regulation of transcription.MYB domain transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMYB
PlantTFDBMYB