PLAZA 3.0 Monocots gene overview : AT5G11320

Gene: AT5G11320 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G11320
Transcript Identifier: AT5G11320.1
Gene Type: Coding gene
Location: 5 : 3611429-3613361 : negative

Family

Gene family: HOM03M000262
(205 genes in 15 species)
specific family
Subfamily: ORTHO03M000543
(13 genes in 5 species)
specific family

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Descriptions

Description: Flavin-binding monooxygenase family protein

Curated Summary: Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.

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Identifiers

Identifier	Name
alias	AtYUC4
alias	YUCCA4
alias	YUC4
uniprot	Q9LFM5

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009851	IDA, IMPRCA,	UniProt	auxin biosynthetic process	1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0022603	IGI	UniProt	regulation of anatomical structure morphogenesis	1 2 3 4 5 6 7 8 9 10 11
GO:2000024	IGI	UniProt	regulation of leaf development	1 2 3 4 5 6 7 8 9 10 11
GO:0009911	IGI	UniProt	positive regulation of flower development	1 2 3 4 5 6 7 8 9 10 11
GO:0010229	IGI, RCA,	UniProt	inflorescence development	1 2 3 4 5 6 7 8 9 10 11 12
GO:0048825	IGI, RCA,	UniProt	cotyledon development	1 2 3 4 5 6 7 8 9 10 11 12
GO:0048827	IGI	Gene Ontology	phyllome development	1
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004497	ISS	Gene Ontology	monooxygenase activity	1
GO:0047434	IDA	UniProt	indolepyruvate decarboxylase activity	1 2 3 4 5 6 7 8 9 10 11
GO:0050660	IEA	UniProt	flavin adenine dinucleotide binding	1 2 3 4 5 6 7 8 9 10
GO:0004499	IEA	UniProt	N,N-dimethylaniline monooxygenase activity	1 2 3 4 5 6 7 8 9 10
GO:0050661	IEA	UniProt	NADP binding	1 2 3 4 5 6 7 8 9 10
GO:0016491	IEA	InterPro	oxidoreductase activity
GO:0016709	IEA	PLAZA Homology	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	HOM03M000262

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	ISM	Gene Ontology	chloroplast	1
GO:0000139	IDA	UniProt	Golgi membrane	1 2 3 4 5 6 7 8 9 10 11
GO:0005654	IDA	UniProt	nucleoplasm	1 2 3 4 5 6 7 8 9 10 11
GO:0005783	IDA	Gene Ontology	endoplasmic reticulum	1
GO:0005789	IDA	UniProt	endoplasmic reticulum membrane	1 2 3 4 5 6 7 8 9 10 11
GO:0005794	IDA	Gene Ontology	Golgi apparatus	1
GO:0005829	IDA	UniProt	cytosol	1 2 3 4 5 6 7 8 9 10 11

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000103	Pyridine nucleotide-disulphide oxidoreductase, class-II
IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
IPR020946	Flavin monooxygenase-like

Mapman id	Description
26.7	misc.oxidases - copper, flavone etc

No SignalP domains detected for this gene.