Gene: AT5G11260 (Arabidopsis thaliana)

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Gene Identifier
AT5G11260
Transcript Identifier
AT5G11260.1
Gene Type
Coding gene
Location
5 : 3593583-3594800 : negative

Family

Gene family
HOM03M001986
(41 genes in 16 species)
specific family

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Descriptions

Description
Basic-leucine zipper (bZIP) transcription factor family protein
Curated Summary
Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.
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Identifiers

Identifier Name
aliasTED 5
aliasELONGATED HYPOCOTYL 5
aliasREVERSAL OF THE DET PHENOTYPE 5
aliasHY5
uniprotO24646

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, RCA, TAS, IEAGene Ontologyregulation of transcription, DNA-dependent1 2 3
GO:0009640TASGene Ontologyphotomorphogenesis1
GO:0010224IMP, IEP, IGIUniProtresponse to UV-B1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0010017IMPUniProtred or far-red light signaling pathway1 2 3 4 5 6 7 8 9 10 11
GO:0010114IEPUniProtresponse to red light1 2 3 4 5 6 7 8 9 10 11
GO:0010218IEPUniProtresponse to far red light1 2 3 4 5 6 7 8 9 10 11
GO:0031539IMPUniProtpositive regulation of anthocyanin metabolic process1 2 3 4 5 6 7 8 9 10 11
GO:0009740IMPUniProtgibberellic acid mediated signaling pathway1 2 3 4 5 6 7 8 9 10 11
GO:0010099IMPUniProtregulation of photomorphogenesis1 2 3 4 5 6 7 8 9 10 11
GO:0009737IMPUniProtresponse to abscisic acid1 2 3 4 5 6 7 8 9 10 11
GO:0080167IEPUniProtresponse to karrikin1 2 3 4 5 6 7 8 9 10 11
GO:0042753IMPUniProtpositive regulation of circadian rhythm1 2 3 4 5 6 7 8 9 10 11
GO:0006406RCAGene OntologymRNA export from nucleus1
GO:0008284RCAGene Ontologypositive regulation of cell proliferation1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0010074RCAGene Ontologymaintenance of meristem identity1
GO:0019722RCAGene Ontologycalcium-mediated signaling1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0051276RCAGene Ontologychromosome organization1
GO:0009585IEAUniProtred, far-red light phototransduction1 2 3 4 5 6 7 8 9 10
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001986

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, TASIEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12
GO:0005515IPIGene Ontologyprotein binding1
GO:0003677IDA, IEAGene OntologyDNA binding1
GO:0003690IPIUniProtdouble-stranded DNA binding1 2 3 4 5 6 7 8 9 10 11
GO:0043565IEAUniProtsequence-specific DNA binding1 2 3 4 5 6 7 8 9 10

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMIEA, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004827Basic-leucine zipper domain
IPR001630cAMP response element binding (CREB) protein

Mapman id Description
27.3.35RNA.regulation of transcription.bZIP transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBbZIP
PlantTFDBbZIP