Gene: AT5G10560 (Arabidopsis thaliana)

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Gene Identifier
AT5G10560
Transcript Identifier
AT5G10560.1
Gene Type
Coding gene
Location
5 : 3336335-3339351 : negative

Family

Gene family
HOM03M000389
(156 genes in 14 species)
specific family
Subfamily
ORTHO03M000201
(21 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Glycosyl hydrolase family protein
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Identifiers

Identifier Name
uniprotQ9LXA8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAUniProtcarbohydrate metabolic process1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553ISS, IEAGene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds1
GO:0009044TASUniProtxylan 1,4-beta-xylosidase activity1 2 3 4 5

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0005773IDAGene Ontologyvacuole1
GO:0005774IDAUniProtvacuolar membrane1 2 3 4 5
GO:0005578IEAUniProtproteinaceous extracellular matrix1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001764Glycoside hydrolase, family 3, N-terminal
IPR002772Glycoside hydrolase family 3 C-terminal domain
IPR017853Glycoside hydrolase, superfamily
IPR026891Fibronectin type III-like domain
IPR026892Glycoside hydrolase family 3

Mapman id Description
10.6.2cell wall.degradation.mannan-xylose-arabinose-fucose
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network