PLAZA 3.0 Monocots gene overview : AT5G09930

Gene: AT5G09930 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G09930
Transcript Identifier: AT5G09930.1
Gene Type: Coding gene
Location: 5 : 3097643-3100241 : negative

Family

Gene family: HOM03M000458
(137 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: ABC transporter family protein

Curated Summary: member of GCN subfamily

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Identifiers

Identifier	Name
alias	ABCF2
alias	ATP-binding cassette F2
uniprot	Q9FIB4

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006200	IEA	UniProt	ATP catabolic process	1 2 3 4

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005215	ISS	UniProt	transporter activity	1 2 3 4 5
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4
GO:0016887	IEA	UniProt	ATPase activity	1 2 3 4
GO:0017111	IEA	InterPro	nucleoside-triphosphatase activity
GO:0000166	IEA	InterPro	nucleotide binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	ISM	Gene Ontology	plasma membrane	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003593	AAA+ ATPase domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter, conserved site
IPR003439	ABC transporter-like

Mapman id	Description
34.16	transport.ABC transporters and multidrug resistance systems

No SignalP domains detected for this gene.