Gene: AT5G09900 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G09900
Transcript Identifier
AT5G09900.3
Gene Type
Coding gene
Location
5 : 3089406-3092434 : negative

Family

Gene family
HOM03M002899
(30 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
26S proteasome regulatory subunit, putative (RPN5)
Curated Summary
Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.
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Identifiers

Identifier Name
aliasEMB2107
aliasMSA
aliasMARIPOSA
aliasEMBRYO DEFECTIVE 2107
aliasREGULATORY PARTICLE NON-ATPASE SUBUNIT 5A
aliasRPN5A
uniprotQ9FIB6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793NASGene Ontologyembryo development ending in seed dormancy1
GO:0006511RCA, TASGene Ontologyubiquitin-dependent protein catabolic process1 2
GO:0007275IMPGene Ontologymulticellular organismal development1
GO:0006094RCAGene Ontologygluconeogenesis1
GO:0006096RCAGene Ontologyglycolysis1
GO:0006635RCAGene Ontologyfatty acid beta-oxidation1
GO:0009407RCAGene Ontologytoxin catabolic process1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009651RCAGene Ontologyresponse to salt stress1
GO:0009853RCAGene Ontologyphotorespiration1
GO:0010388RCAGene Ontologycullin deneddylation1
GO:0042023RCAGene OntologyDNA endoreduplication1
GO:0043161RCAGene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0043248RCAGene Ontologyproteasome assembly1
GO:0046686RCAGene Ontologyresponse to cadmium ion1
GO:0051510RCAGene Ontologyregulation of unidimensional cell growth1
GO:0051788RCAGene Ontologyresponse to misfolded protein1
GO:0080129RCAGene Ontologyproteasome core complex assembly1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAPLAZA Homologyprotein bindingHOM03M002899

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, IDA, ISMUniProtnucleus1 2 3 4 5 6 7
GO:0008541ISSGene Ontologyproteasome regulatory particle, lid subcomplex1
GO:0005737IEA, IDAUniProtcytoplasm1 2 3 4 5 6
GO:0000502IEA, IDAUniProtproteasome complex1 2 3 4 5 6
GO:0005829IDAGene Ontologycytosol1
GO:0009506IDAGene Ontologyplasmodesma1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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No InterPro domains detected for this gene.
Mapman id Description
29.5.11.20protein.degradation.ubiquitin.proteasom
No SignalP domains detected for this gene.