Gene: AT5G09860 (Arabidopsis thaliana)

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Gene Identifier
AT5G09860
Transcript Identifier
AT5G09860.1
Gene Type
Coding gene
Location
5 : 3066815-3070733 : positive

Family

Gene family
HOM03M005369
(19 genes in 16 species)
specific family

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Descriptions

Description
nuclear matrix protein-related
Curated Summary
Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.
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Identifiers

Identifier Name
aliasHPR1
aliasAtTHO1
aliasTHO1
aliasAtHPR1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010267IMPGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0031047IMPGene Ontologygene silencing by RNA1
GO:0006406IMPGene OntologymRNA export from nucleus1
GO:0050832IMPGene Ontologydefense response to fungus1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDAGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR021861THO complex, subunit THOC1

Mapman id Description
35.1not assigned.no ontology
No SignalP domains detected for this gene.