Gene: AT5G09660 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G09660
Transcript Identifier
AT5G09660.4
Gene Type
Coding gene
Location
5 : 2993691-2995551 : negative

Family

Gene family
HOM03M000690
(100 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
peroxisomal NAD-malate dehydrogenase 2
Curated Summary
encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.
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Identifiers

Identifier Name
aliasperoxisomal NAD-malate dehydrogenase 2
aliasPMDH2
uniprotQ9ZP05

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031998IGI, IMPGene Ontologyregulation of fatty acid beta-oxidation1 2
GO:0080093IMPGene Ontologyregulation of photorespiration1
GO:0000096RCAGene Ontologysulfur amino acid metabolic process1
GO:0000165RCAGene OntologyMAPK cascade1
GO:0006098RCAGene Ontologypentose-phosphate shunt1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0006364RCAGene OntologyrRNA processing1
GO:0006546RCAGene Ontologyglycine catabolic process1
GO:0006612RCAGene Ontologyprotein targeting to membrane1
GO:0006636RCAGene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006655RCAGene Ontologyphosphatidylglycerol biosynthetic process1
GO:0006733RCAGene Ontologyoxidoreduction coenzyme metabolic process1
GO:0006766RCAGene Ontologyvitamin metabolic process1
GO:0008652RCAGene Ontologycellular amino acid biosynthetic process1
GO:0009072RCAGene Ontologyaromatic amino acid family metabolic process1
GO:0009106RCAGene Ontologylipoate metabolic process1
GO:0009108RCAGene Ontologycoenzyme biosynthetic process1
GO:0009117RCAGene Ontologynucleotide metabolic process1
GO:0009416RCAGene Ontologyresponse to light stimulus1
GO:0009617RCAGene Ontologyresponse to bacterium1
GO:0009657RCAGene Ontologyplastid organization1
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0009853RCAGene Ontologyphotorespiration1
GO:0009862RCAGene Ontologysystemic acquired resistance, salicylic acid mediated signaling pathway1
GO:0009867RCAGene Ontologyjasmonic acid mediated signaling pathway1
GO:0009902RCAGene Ontologychloroplast relocation1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0010103RCAGene Ontologystomatal complex morphogenesis1
GO:0010207RCAGene Ontologyphotosystem II assembly1
GO:0010304RCAGene OntologyPSII associated light-harvesting complex II catabolic process1
GO:0010310RCAGene Ontologyregulation of hydrogen peroxide metabolic process1
GO:0010363RCAGene Ontologyregulation of plant-type hypersensitive response1
GO:0015994RCAGene Ontologychlorophyll metabolic process1
GO:0015995RCAGene Ontologychlorophyll biosynthetic process1
GO:0016117RCAGene Ontologycarotenoid biosynthetic process1
GO:0019216RCAGene Ontologyregulation of lipid metabolic process1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019748RCAGene Ontologysecondary metabolic process1
GO:0030154RCAGene Ontologycell differentiation1
GO:0031348RCAGene Ontologynegative regulation of defense response1
GO:0031408RCAGene Ontologyoxylipin biosynthetic process1
GO:0035304RCAGene Ontologyregulation of protein dephosphorylation1
GO:0043085RCAGene Ontologypositive regulation of catalytic activity1
GO:0044242RCAGene Ontologycellular lipid catabolic process1
GO:0044272RCAGene Ontologysulfur compound biosynthetic process1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0006097IEAUniProtglyoxylate cycle1 2 3 4
GO:0006108IEAUniProtmalate metabolic process1 2 3 4
GO:0006099IEAUniProttricarboxylic acid cycle1 2 3 4
GO:0044262IEAInterProcellular carbohydrate metabolic process
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016615ISS, IEAGene Ontologymalate dehydrogenase activity1
GO:0030060IEAUniProtL-malate dehydrogenase activity1 2 3 4
GO:0016491IEAInterProoxidoreductase activity
GO:0003824IEAInterProcatalytic activity
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0009941IDAGene Ontologychloroplast envelope1
GO:0009507IDAGene Ontologychloroplast1
GO:0005773IDAGene Ontologyvacuole1
GO:0005777IDAGene Ontologyperoxisome1
GO:0048046IDAGene Ontologyapoplast1
GO:0042579ISSGene Ontologymicrobody1
GO:0009514IEAUniProtglyoxysome1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010097Malate dehydrogenase, type 1
IPR001252Malate dehydrogenase, active site
IPR016040NAD(P)-binding domain
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR022383Lactate/malate dehydrogenase, C-terminal
IPR001236Lactate/malate dehydrogenase, N-terminal
IPR001557L-lactate/malate dehydrogenase

Mapman id Description
6.3gluconeogenesis / glyoxylate cycle.Malate DH
No SignalP domains detected for this gene.