Gene: AT5G08470 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G08470
Transcript Identifier
AT5G08470.1
Gene Type
Coding gene
Location
5 : 2735925-2742731 : positive

Family

Gene family
HOM03M000030
(1059 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
peroxisome 1
Curated Summary
an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.
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Identifiers

Identifier Name
aliasperoxisome 1
aliasPEX1
aliasEMB2817
aliasEMBRYO DEFECTIVE 2817
uniprotQ9FNP1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006635IMP, RCA, UniProtfatty acid beta-oxidation1 2 3 4 5 6
GO:0016558IMP, RCA, UniProtprotein import into peroxisome matrix1 2 3 4 5 6
GO:0007031RCA, IEAGene Ontologyperoxisome organization1
GO:0006625IEAInterProprotein targeting to peroxisome

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016887ISSGene OntologyATPase activity1
GO:0005515IPIGene Ontologyprotein binding1
GO:0005524IEAUniProtATP binding1 2 3 4
GO:0042623IEAUniProtATPase activity, coupled1 2 3 4
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000030
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000030
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000030
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000030
GO:0043167IEAPLAZA Homologyion bindingHOM03M000030
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000030
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000030
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000030
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000030
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000030
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000030
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000030
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000030
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000030
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000030
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000030
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000030
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000030
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000030
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000030
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000030
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISMGene Ontologyplasma membrane1
GO:0005778IEAUniProtperoxisomal membrane1 2 3 4
GO:0005777IEAInterProperoxisome

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003959ATPase, AAA-type, core
IPR025653Peroxisome biogenesis factor 1
IPR009010Aspartate decarboxylase-like domain
IPR003960ATPase, AAA-type, conserved site
IPR015342Peroxisome biogenesis factor 1, N-terminal

Mapman id Description
29.3.5protein.targeting.peroxisomes
No SignalP domains detected for this gene.