Gene: AT5G07660 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G07660
Transcript Identifier
AT5G07660.1
Gene Type
Coding gene
Location
5 : 2422839-2429912 : positive

Family

Gene family
HOM03M002304
(36 genes in 16 species)
specific family
Subfamily
ORTHO03M005392
(6 genes in 5 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
structural maintenance of chromosomes 6A
Curated Summary
Encodes SMC6A (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6A), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.
Show more...

Identifiers

Identifier Name
aliasSMC6A
aliasstructural maintenance of chromosomes 6A
uniprotQ9FLR5

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007059ISSGene Ontologychromosome segregation1
GO:0000724IEA, IMPUniProtdouble-strand break repair via homologous recombination1 2 3
GO:0007062IMPUniProtsister chromatid cohesion1 2 3
GO:0010165IMPUniProtresponse to X-ray1 2 3
GO:0006261RCAGene OntologyDNA-dependent DNA replication1
GO:0006306RCAGene OntologyDNA methylation1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0007267RCAGene Ontologycell-cell signaling1
GO:0009616RCAGene Ontologyvirus induced gene silencing1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0031048RCAGene Ontologychromatin silencing by small RNA1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0048451RCAGene Ontologypetal formation1
GO:0048453RCAGene Ontologysepal formation1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0051276IEAUniProtchromosome organization1 2
GO:0000160IEAUniProtphosphorelay signal transduction system1 2
GO:0023014IEAUniProtsignal transduction by phosphorylation1 2
GO:0006281IEAInterProDNA repair
GO:0000725IEAPLAZA Homologyrecombinational repairHOM03M002304

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEA, ISSUniProtATP binding1 2 3
GO:0000155IEAUniProtphosphorelay sensor kinase activity1 2
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, ISSGene Ontologynucleus1 2
GO:0016020IEAUniProtmembrane1 2
GO:0030915IEAUniProtSmc5-Smc6 complex1 2
GO:0005694IEAInterProchromosome

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003395RecF/RecN/SMC, N-terminal
IPR010935SMCs flexible hinge
IPR027132Structural maintenance of chromosomes protein 6
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
31.2cell.division
No SignalP domains detected for this gene.