Gene: AT5G06700 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G06700
Transcript Identifier
AT5G06700.1
Gene Type
Coding gene
Location
5 : 2063638-2065810 : positive

Family

Gene family
HOM03M000049
(780 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Plant protein of unknown function (DUF828)
Curated Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.
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Identifiers

Identifier Name
aliasTRICHOME BIREFRINGENCE
aliasTBR

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009834IMPGene Ontologysecondary cell wall biogenesis1
GO:0030244IMPGene Ontologycellulose biosynthetic process1
GO:0009827IMPGene Ontologyplant-type cell wall modification1
GO:0045489IMPGene Ontologypectin biosynthetic process1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0005768IDAGene Ontologyendosome1
GO:0005794IDAGene OntologyGolgi apparatus1
GO:0005802IDAGene Ontologytrans-Golgi network1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR026057PC-Esterase
IPR025846PMR5 N-terminal domain

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.