PLAZA 3.0 Monocots gene overview : AT5G06685

Gene: AT5G06685 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G06685
Transcript Identifier: AT5G06685.1
Gene Type: RNA gene
Location: 5 : 2060153-2060234 : negative

Family

No gene family defined for this gene.

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Descriptions

Description: pre-tRNA

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Identifiers

Identifier	Name

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006414	TAS	Gene Ontology	translational elongation	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0030533	TAS	Gene Ontology	triplet codon-amino acid adaptor activity	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

No InterPro domains detected for this gene.

Mapman id	Description
29.2.7.1.16	protein.synthesis.transfer RNA.nucleus.tRNA-Ser

No SignalP domains detected for this gene.