Gene: AT5G05450 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G05450
Transcript Identifier
AT5G05450.1
Gene Type
Coding gene
Location
5 : 1612077-1615195 : positive

Family

Gene family
HOM03M000037
(943 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
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Identifiers

Identifier Name
uniprotQ9FLB0

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008026IEA, ISSUniProtATP-dependent helicase activity1 2 3 4
GO:0005524IEAUniProtATP binding1 2 3
GO:0003723IEAUniProtRNA binding1 2 3
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000037
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000037
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000037
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03M000037
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000037
GO:0043167IEAPLAZA Homologyion bindingHOM03M000037
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000037
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000037
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000037
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000037
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000037
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000037
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000037
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03M000037
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000037
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000037
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000037
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000037
GO:0016887IEAPLAZA HomologyATPase activityHOM03M000037
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000037
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000037
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000037
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000037
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000037
GO:0005488IEAPLAZA HomologybindingHOM03M000037
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000037
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000037
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03M000037

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001650Helicase, C-terminal
IPR014014RNA helicase, DEAD-box type, Q motif
IPR025313Domain of unknown function DUF4217
IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site

Mapman id Description
29.2.2.2.1protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases
29.2.2.3.5protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases
No SignalP domains detected for this gene.