Gene: AT5G05280 (Arabidopsis thaliana)

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Gene Identifier
AT5G05280
Transcript Identifier
AT5G05280.1
Gene Type
Coding gene
Location
5 : 1565509-1566039 : negative

Family

Gene family
HOM03M000020
(1544 genes in 16 species)
specific family
Subfamily
ORTHO03M011594
(4 genes in 4 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RING/U-box superfamily protein
Curated Summary
Encodes a RING-finger E3 ligase protein that controls anther dehiscence by positively regulating the expression of DAD1 in the jasmonic acid biosynthesis pathway.
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Identifiers

Identifier Name
aliasDEFECTIVE IN ANTHER DEHISCENCE1- ( DAD1-) Activating Factor
aliasDAF
uniprotQ9FLC6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009555IMPUniProtpollen development1 2 3 4 5
GO:0009901IMPUniProtanther dehiscence1 2 3 4 5
GO:0016567IDAGene Ontologyprotein ubiquitination1
GO:0048443IMPGene Ontologystamen development1
GO:0080141IMPUniProtregulation of jasmonic acid biosynthetic process1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEA, ISSUniProtzinc ion binding1 2 3 4 5
GO:0004842IDAUniProtubiquitin-protein ligase activity1 2 3 4 5
GO:0005515IEAInterProprotein binding
GO:0043169IEAPLAZA Homologycation bindingHOM03M000020
GO:0005488IEAPLAZA HomologybindingHOM03M000020
GO:0043167IEAPLAZA Homologyion bindingHOM03M000020
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03M000020
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03M000020

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAUniProtintegral to membrane1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.